Model building

From Biowerkzeug Wiki
Revision as of 15:26, 30 June 2008 by Oliver (talk | contribs) (stub)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Modeller
does homology building.
Dowser
can help you to solvate a protein before simulations.
VMD
comes with a lot of useful modeling tools in ExtensionsModeling; it can auto-build xplor-style psf files, add ions to the system, solvate, mutate, ...
Charmm
has a fairly complete (but as always, idiosyncratic) model building facility with the IC commands.