Difference between revisions of "Main Page"
From Biowerkzeug Wiki
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− | + | <div id="hauptseite"> | |
− | == | + | {| width="100%" cellspacing="0" cellpadding="0" |
+ | | colspan="2" | | ||
+ | This Wiki discusses biomolecular simulations with '''[[Hippo]]''' and other molecular dynamics/Monte Carlo codes. It serves as a repository for the community and complements the [http://forums.biowerkzeug.org forums]. | ||
+ | |||
+ | Please contribute your own knowledge to this Wiki: If anything is unclear and you know how to write it better – change it. If you have useful tips and tricks – share them with everyone else. If you have comments on any article in this Wiki – start a discussion on the ''discussion'' page that accompanies every article (look in the top menu bar). We only ask you to [[Special:Userlogin|register]] when you edit pages. See [[Help:Editing|Help→Editing]] to get started on contributing to this community resource. | ||
+ | |||
+ | Follow the links below, use the search on the left, or browse articles by [[Special:Categories|category]]. | ||
+ | |||
+ | |- | ||
+ | | width="50%" style="vertical-align:top;" | | ||
+ | <div id="Hippo" class="hauptseite-links"> | ||
+ | == Hippo == | ||
+ | <div class="inhalt"> | ||
+ | [[Image:Hippopotamus.jpg|thumb|right|Not this hippo.]] | ||
+ | * [[Hippo|Features]] | ||
+ | * [[Download]] | ||
+ | * [[Simulations]] | ||
+ | * [[Analysis]] | ||
+ | * [[Graphical interface]] | ||
+ | * [[Files]] | ||
+ | * [[Performance]] | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | <div id="Methods" class="hauptseite-links"> | ||
+ | |||
+ | == Methods == | ||
+ | <div class="inhalt"> | ||
* [[Molecular dynamics]] | * [[Molecular dynamics]] | ||
* [[Monte Carlo]] | * [[Monte Carlo]] | ||
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* [[Solvents]] | * [[Solvents]] | ||
* [[Membranes]] | * [[Membranes]] | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | | width="50%" style="vertical-align:top;" | | ||
+ | |||
+ | <div id="Simulation protocols" class="hauptseite-rechts"> | ||
+ | == Simulation protocols == | ||
+ | <div class="inhalt"> | ||
+ | * [[Globular proteins]] in solvent | ||
+ | * [[Membrane proteins]] in membrane and solvent | ||
+ | * [[Free energy calculations]] | ||
+ | * [[Transition path sampling]] | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | <div id="Visualization" class="hauptseite-rechts"> | ||
+ | == Visualization == | ||
+ | <div class="inhalt"> | ||
+ | * [[Visualization software|Software]] | ||
+ | * [[Visualization tutorial|tutorial]] with [[VMD]] | ||
+ | * [[Movie tutorial]] | ||
+ | </div> | ||
+ | </div> | ||
+ | <div id="Software" class="hauptseite-rechts"> | ||
− | == | + | == Software == |
+ | <div class="inhalt"> | ||
+ | * [[Molecular dynamics codes]] | ||
+ | * [[Monte Carlo codes]] | ||
+ | * [[Electrostatics]] and [[Brownian dynamics]] | ||
+ | * [[Model building]] | ||
+ | * [[Visualization software|Visualization]] | ||
+ | * [[Analysis software]] | ||
+ | </div> | ||
+ | </div> | ||
− | + | |} | |
− | + | </div> | |
− | + | __NOTOC__ | |
− |
Latest revision as of 15:08, 18 November 2008
This Wiki discusses biomolecular simulations with Hippo and other molecular dynamics/Monte Carlo codes. It serves as a repository for the community and complements the forums. Please contribute your own knowledge to this Wiki: If anything is unclear and you know how to write it better – change it. If you have useful tips and tricks – share them with everyone else. If you have comments on any article in this Wiki – start a discussion on the discussion page that accompanies every article (look in the top menu bar). We only ask you to register when you edit pages. See Help→Editing to get started on contributing to this community resource. Follow the links below, use the search on the left, or browse articles by category. | |
Simulation protocols
Visualization |